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- #
- # Copyright 2019 The FATE Authors. All Rights Reserved.
- #
- # Licensed under the Apache License, Version 2.0 (the "License");
- # you may not use this file except in compliance with the License.
- # You may obtain a copy of the License at
- #
- # http://www.apache.org/licenses/LICENSE-2.0
- #
- # Unless required by applicable law or agreed to in writing, software
- # distributed under the License is distributed on an "AS IS" BASIS,
- # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- # See the License for the specific language governing permissions and
- # limitations under the License.
- #
- import argparse
- from pipeline.backend.pipeline import PipeLine
- from pipeline.component import HeteroFeatureBinning, HeteroFeatureSelection, DataStatistics, Evaluation
- from pipeline.component import FeatureScale
- from pipeline.component import DataTransform
- from pipeline.component import HeteroLR
- from pipeline.component import Intersection
- from pipeline.component import Reader
- from pipeline.interface import Data
- from pipeline.interface import Model
- from pipeline.utils.tools import load_job_config
- def main(config="../../config.yaml", namespace=""):
- # obtain config
- if isinstance(config, str):
- config = load_job_config(config)
- parties = config.parties
- guest = parties.guest[0]
- host = parties.host[0]
- arbiter = parties.arbiter[0]
- guest_train_data = {"name": "breast_hetero_guest", "namespace": "experiment"}
- guest_test_data = {"name": "breast_hetero_guest", "namespace": "experiment"}
- host_train_data = {"name": "breast_hetero_host_tag_value", "namespace": "experiment"}
- host_test_data = {"name": "breast_hetero_host_tag_value", "namespace": "experiment"}
- # initialize pipeline
- pipeline = PipeLine()
- # set job initiator
- pipeline.set_initiator(role='guest', party_id=guest)
- # set participants information
- pipeline.set_roles(guest=guest, host=host, arbiter=arbiter)
- # define Reader components to read in data
- reader_0 = Reader(name="reader_0")
- reader_1 = Reader(name="reader_1")
- # configure Reader for guest
- reader_0.get_party_instance(role='guest', party_id=guest).component_param(table=guest_train_data)
- reader_1.get_party_instance(role='guest', party_id=guest).component_param(table=guest_test_data)
- # configure Reader for host
- reader_0.get_party_instance(role='host', party_id=host).component_param(table=host_train_data)
- reader_1.get_party_instance(role='host', party_id=host).component_param(table=host_test_data)
- # define DataTransform components
- data_transform_0 = DataTransform(name="data_transform_0") # start component numbering at 0
- data_transform_1 = DataTransform(name="data_transform_1") # start component numbering at 1
- param = {
- "with_label": True,
- "label_name": "y",
- "label_type": "int",
- "output_format": "dense",
- "missing_fill": True,
- "missing_fill_method": "mean",
- "outlier_replace": False,
- "outlier_replace_method": "designated",
- "outlier_replace_value": 0.66,
- "outlier_impute": "-9999"
- }
- # get DataTransform party instance of guest
- data_transform_0_guest_party_instance = data_transform_0.get_party_instance(role='guest', party_id=guest)
- # configure DataTransform for guest
- data_transform_0_guest_party_instance.component_param(**param)
- # get and configure DataTransform party instance of host
- data_transform_1.get_party_instance(role='guest', party_id=guest).component_param(**param)
- param = {
- "input_format": "tag",
- "with_label": False,
- "tag_with_value": True,
- "delimitor": ";",
- "output_format": "dense"
- }
- data_transform_0.get_party_instance(role='host', party_id=host).component_param(**param)
- data_transform_1.get_party_instance(role='host', party_id=host).component_param(**param)
- # define Intersection components
- intersection_0 = Intersection(name="intersection_0", intersect_method="raw")
- intersection_1 = Intersection(name="intersection_1", intersect_method="raw")
- param = {
- "name": 'hetero_feature_binning_0',
- "method": 'optimal',
- "optimal_binning_param": {
- "metric_method": "iv",
- "init_bucket_method": "quantile"
- },
- "bin_indexes": -1
- }
- hetero_feature_binning_0 = HeteroFeatureBinning(**param)
- statistic_0 = DataStatistics(name='statistic_0')
- param = {
- "name": 'hetero_feature_selection_0',
- "filter_methods": ["unique_value", "iv_filter", "statistic_filter"],
- "unique_param": {
- "eps": 1e-6
- },
- "iv_param": {
- "metrics": ["iv", "iv"],
- "filter_type": ["top_k", "threshold"],
- "take_high": [True, True],
- "threshold": [10, 0.1]
- },
- "statistic_param": {
- "metrics": ["coefficient_of_variance", "skewness"],
- "filter_type": ["threshold", "threshold"],
- "take_high": [True, False],
- "threshold": [0.001, -0.01]
- },
- "select_col_indexes": -1
- }
- hetero_feature_selection_0 = HeteroFeatureSelection(**param)
- hetero_feature_selection_1 = HeteroFeatureSelection(name='hetero_feature_selection_1')
- param = {
- "name": "hetero_scale_0",
- "method": "standard_scale"
- }
- hetero_scale_0 = FeatureScale(**param)
- hetero_scale_1 = FeatureScale(name='hetero_scale_1')
- param = {
- "penalty": "L2",
- "optimizer": "nesterov_momentum_sgd",
- "tol": 1e-4,
- "alpha": 0.01,
- "max_iter": 5,
- "early_stop": "diff",
- "batch_size": -1,
- "learning_rate": 0.15,
- "init_param": {
- "init_method": "zeros"
- },
- "validation_freqs": None,
- "early_stopping_rounds": None
- }
- hetero_lr_0 = HeteroLR(name='hetero_lr_0', **param)
- evaluation_0 = Evaluation(name='evaluation_0')
- # add components to pipeline, in order of task execution
- pipeline.add_component(reader_0)
- pipeline.add_component(reader_1)
- pipeline.add_component(data_transform_0, data=Data(data=reader_0.output.data))
- pipeline.add_component(data_transform_1,
- data=Data(data=reader_1.output.data), model=Model(data_transform_0.output.model))
- # set data input sources of intersection components
- pipeline.add_component(intersection_0, data=Data(data=data_transform_0.output.data))
- pipeline.add_component(intersection_1, data=Data(data=data_transform_1.output.data))
- # set train & validate data of hetero_lr_0 component
- pipeline.add_component(hetero_feature_binning_0, data=Data(data=intersection_0.output.data))
- pipeline.add_component(statistic_0, data=Data(data=intersection_0.output.data))
- pipeline.add_component(hetero_feature_selection_0, data=Data(data=intersection_0.output.data),
- model=Model(isometric_model=[hetero_feature_binning_0.output.model,
- statistic_0.output.model]))
- pipeline.add_component(hetero_feature_selection_1, data=Data(data=intersection_1.output.data),
- model=Model(hetero_feature_selection_0.output.model))
- pipeline.add_component(hetero_scale_0, data=Data(data=hetero_feature_selection_0.output.data))
- pipeline.add_component(hetero_scale_1, data=Data(data=hetero_feature_selection_1.output.data),
- model=Model(hetero_scale_0.output.model))
- # set train & validate data of hetero_lr_0 component
- pipeline.add_component(hetero_lr_0, data=Data(train_data=hetero_scale_0.output.data,
- validate_data=hetero_scale_1.output.data))
- pipeline.add_component(evaluation_0, data=Data(data=[hetero_lr_0.output.data]))
- # compile pipeline once finished adding modules, this step will form conf and dsl files for running job
- pipeline.compile()
- # fit model
- pipeline.fit()
- # query component summary
- print(pipeline.get_component("hetero_lr_0").get_summary())
- if __name__ == "__main__":
- parser = argparse.ArgumentParser("PIPELINE DEMO")
- parser.add_argument("-config", type=str,
- help="config file")
- args = parser.parse_args()
- if args.config is not None:
- main(args.config)
- else:
- main()
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